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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825625.1_cds_XP_016502390.1_16037
CDS Infomation

[gene=LOC107820590] [db_xref=GeneID:107820590] [protein=linoleate 13S-lipoxygenase 2-1, chloroplastic-like] [partial=3'] [protein_id=XP_016502390.1] [location=complement(join(<251..361,508..858,2866..3134,4318..4669))] [gbkey=CDS]
Sequence

ATGTTGAAGCCTCAGCTTCATCAAATATCACAATCTACAAAAACCCTAATCCCATGGAGT
AGTACTAGATCATTTATTTCTGGAGAAATCTTAGCCTCTTTTCCCATCAATATTTTAAAT
AAAAACCTTAGACAAAATCAGAAGAAGAATTTTAGGGTTCATTATAATGCTGCAAATAGC
ACAAAAGCTGTGCTTAGTTCTACTGAGAAATCTACTAGTGTAAAAGCAGTGATAACTGTC
CAAAAAACAGTTGGAGGCACTAACTTATCTTTAACAAGAGGACTTGATGATATTGGTGAT
TTACTTGGTAAAACACTCCTTTTGTGGATTGTTGCAGCTGAGCTTGATCCTAAGACTGGA
ATAAAGAAACCAAGCATTAAGACGTTTGCACATCGTGGACGAGATGTGGAAGGTTACACA
CAATATGAGGCTGATTTTGTAATTCCTGAAGACTTTGGGGAGGTTGGAGCAGTTTTAGTA
CAAAATGAGCACCACAAGGAAATGTATGTCAAGAATATAGTAATCGATGGCTTTCCCCAT
GGCATAGTTAATATTACTTGCGATTCTTGGGTTCACTCCAAATTTGATGATCCTGAGGAA
AGGATTTTCTTCACCAACAAGTCATATCTACCATCTCAAACACCAAGTGCAATAAAGAGA
TTAAGAGGAAAAGAACTTGTAATATTGAGAGGTGATGGAATTGGACAACGTAAAAAGTTC
GAGAGAGTATATGATTATGATGTTTACAATGATATTGGAGATCCTGATGCCAGTGATGAT
ACTAAAAGACCAGTACTTGGTGGTAATGAATTCCCTTATCCTAGAAGATGCAGAACTGGT
GGCCCACGAAGCGAGAAAGGTACTCCCGACGCTTCAATTTATATGACACATTTAAAATCT
TGGTTTAAAGATGTGGAATTTGCTCGTCAAACCTTAGCTGGTTTGAACCCCTATAGTATA
CGCTTGGTTACGGAATGGCCATTGAAGAGCAAGCTAGACCCTGAGATATATGGACCTCCT
GAATCAGCAATCACAAAAGAGCTAATTGAGCTAGAAATTGCAGGATTCATGACTGTTGAA
GAG

Peptide Sequence

PEP ID

XP_016502390.1
PEP Infomation

PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like, partial [Nicotiana tabacum]
Sequence

MLKPQLHQISQSTKTLIPWSSTRSFISGEILASFPINILNKNLRQNQKKNFRVHYNAANS
TKAVLSSTEKSTSVKAVITVQKTVGGTNLSLTRGLDDIGDLLGKTLLLWIVAAELDPKTG
IKKPSIKTFAHRGRDVEGYTQYEADFVIPEDFGEVGAVLVQNEHHKEMYVKNIVIDGFPH
GIVNITCDSWVHSKFDDPEERIFFTNKSYLPSQTPSAIKRLRGKELVILRGDGIGQRKKF
ERVYDYDVYNDIGDPDASDDTKRPVLGGNEFPYPRRCRTGGPRSEKGTPDASIYMTHLKS
WFKDVEFARQTLAGLNPYSIRLVTEWPLKSKLDPEIYGPPESAITKELIELEIAGFMTVE
E

Transcript Sequence

Gene sequence data has not been registered.